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DNA Research 1998 5(5):277-286; doi:10.1093/dnares/5.5.277
© 1998 by Kazusa DNA Research Institute
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Prediction of the Coding Sequences of Unidentified Human Genes. XI. The Complete Sequences of 100 New cDNA Clones from Brain Which Code for Large Proteins in vitro

Takahiro Nagase, Ken-ichi Ishikawa, Mikita Suyama, Reiko Kikuno, Nobuyuki Miyajima, Ayako Tanaka, Hirokazu Kotani, Nobuo Nomura and Osamu Ohara*

Kazusa DNA Research Institute 1532-3 Yana, Kisarazu, Chiba 292-0812, Japan

* To whom correspondence should be addressed. Tel. +81-438-52-3913, Fax. +81-438-52-3914, E-mail: ohara{at}kazusa.or.jp

In our series of projects for accumulating sequence information on the coding sequences of unidentified human genes, we have newly determined the sequences of 100 cDNA clones from a set of size fractionated human brain cDNA libraries, and predicted the coding sequences of the corresponding genes, named KIAA0711 to KIAA0810. These cDNA clones were selected according to their coding potentials of large proteins (50 kDa and more) in vitro. The average sizes of the inserts and corresponding open reading frames were 4.3 kb and 2.6 kb (869 amino acid residues), respectively. Sequence analyses against the public databases indicated that the predicted coding sequences of 78 genes were similar to those of known genes, 64% of which (50 genes) were categorized as proteins functionally related to cell signaling/communication, cell structure/motility and nucleic acid management. As additional information concerning genes characterized in this study, the chromosomal locations of the clones were determined by using human-rodent hybrid panels and the expression profiles among 10 human tissues were examined by reverse transcription-coupled polymerase chain reaction which was substantially improved by enzyme-linked immunosorbent assay.

Key words: large proteins; in vitro transcription/translation; cDNA sequencing; expression profile; chromosomal location; brain


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